---
title: "Environmental Data Science Lab - Highlights"
output: 
  flexdashboard::flex_dashboard:
    storyboard: true
    social: menu
    source: embed
    css: styles.css
---

```{r setup, include=FALSE}
library(flexdashboard)
```

```{r}
library(tidyverse)
library(leaflet)
library(mapview)
library(mapedit)
library(ggmap)
library(sf)
library(here)
library(glue)
library(fs)
library(vembedr)

# paths
gkey_txt <- "~/private/google-maps-api-key_bdbest-csuci-invite.txt"
pts_csv <- here("data/pts.csv")

register_google(readLines(gkey_txt))

# create pts_csv
if (!file.exists(pts_csv)){
  pts_df <- tribble(
    ~place,
    "California State University Channel Islands",
    "Santa Barbara, CA") %>% 
    mutate_geocode(place)
  
  write_csv(pts_df, pts_csv)
}
pts_df <- read_csv(pts_csv)

# geocode any missing places
pts_todo <- filter(pts_df, is.na(lon), is.na(lat))
if (nrow(pts_todo)>0){
  pts_df <- rbind(
    pts_df %>% 
      filter(!is.na(lon) & !is.na(lat)),
    pts_todo %>% 
      mutate_geocode(place))
}

# convert to points
pts <- pts_df %>% 
  st_as_sf(coords = c("lon", "lat"), crs=4326)
```

```{r mapedit, eval=F}
# only run this R chunk to move markers
pts <- editFeatures(places, label=~place)
pts_df <- pts %>% 
  mutate(
    lon = st_coordinates(geometry)[1,],
    lat = st_coordinates(geometry)[1,]) %>% 
  st_drop_geometry()
write_csv(pts_df, pts_csv)
```

### **Welcome** {data-commentary-width=400}

```{r}
leaflet(pts) %>% 
  addProviderTiles(
    providers$Stamen.Watercolor,
    options = providerTileOptions(opacity=0.3)) %>% 
  addMarkers(
    label = ~ place)
```

*** 

Ahoy Mateys!

Welcome to a reel of research highlights for Dr. Ben Best.

```{r}
vembedr::embed_vimeo(178485416, width=382)
```


https://vimeo.com/

### **Route** ships around whale hotspots {data-commentary-width=400}

![](https://raw.githubusercontent.com/bbest/consmap/master/img/routing_animation.gif)

*** 

Some commentary about Frame 2.

For more see [EcoQuants](https://ecoquants.com/app/routing/).

```{r}
shiny::absolutePanel(
  leaflet(pts, width=382, height=200) %>% 
    addProviderTiles(
      providers$Stamen.Watercolor,
      options = providerTileOptions(opacity=0.3)) %>% 
    addMarkers(
      label = ~ place) %>% 
    addMiniMap(
      tiles = providers$Stamen.Watercolor,
      toggleDisplay = TRUE), bottom=0)
```


### Frame 3  {#frame3}

```{r}
plot(1:10)
```

*** 

Some commentary about Frame 3.